CDS

Accession Number TCMCG057C48540
gbkey CDS
Protein Id XP_018452411.1
Location join(9974916..9975248,9975504..9975860,9975937..9976379,9976453..9976547,9976618..9976793)
Gene LOC108823654
GeneID 108823654
Organism Raphanus sativus

Protein

Length 467aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596909.1
Definition PREDICTED: tryptophan synthase beta chain 1, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description tryptophan synthase
KEGG_TC -
KEGG_Module M00023        [VIEW IN KEGG]
KEGG_Reaction R00674        [VIEW IN KEGG]
R02340        [VIEW IN KEGG]
R02722        [VIEW IN KEGG]
KEGG_rclass RC00209        [VIEW IN KEGG]
RC00210        [VIEW IN KEGG]
RC00700        [VIEW IN KEGG]
RC00701        [VIEW IN KEGG]
RC02868        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01696        [VIEW IN KEGG]
EC 4.2.1.20        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00400        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000162        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004834        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006568        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006586        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009072        [VIEW IN EMBL-EBI]
GO:0009073        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009683        [VIEW IN EMBL-EBI]
GO:0009684        [VIEW IN EMBL-EBI]
GO:0009850        [VIEW IN EMBL-EBI]
GO:0009851        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034754        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0042430        [VIEW IN EMBL-EBI]
GO:0042435        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046219        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGCCTCAAGCACCGTCGCTTCTTTCCGAACCTCCGTTTCTTCAGCTCCTTCCCCATCCTCTTCTCTAATAACCCATTCGAGATCCCCCTCCAAAGCTCTCAAATTCACACCTCTGCCATCGTCTCGCTCAAGGCCATCCTTCTCCGTCTCCTGCACCATCGCCAAGGACCCGCCTGTCCTCATGTCCGACCCGTCTCTCTGGCAACGACCCGATTCGTTCGGTCGGTTCGGGAAGTTTGGTGGCAAGTATGTCCCCGAGACGCTAATGCACGCTCTCTCTGAGCTCGAATCTGCTTTTCATTCCCTCGCCGCCGACGATGATTTCCAGAGAGAGTTGGCTGGGATCTTGAAAGACTACGTGGGTAGAGAAAGCCCTCTGTATTTTGCGGAGAGGCTTACGGAGCATTACCGCCGCGAGAACGGAGAAGGTCCTCTTATATACTTGAAGAGAGAAGACCTGAACCACACAGGAGCGCACAAGATAAACAACGCCGTCGCTCAGGCTCTTCTCGCCAAGCGTTTGGGGAAGAAGAGGATTATCGCTGAGACGGGAGCTGGTCAGCACGGTGTGGCTACAGCTACCGTGTGTGCTCGTTTTGGTCTGGACTGCATTATCTATATGGGTGCTCAAGATATGGAGAGACAAGCGCTCAATGTGTTCAGGATGCGACTTCTTGGTGCCGAGGTGAGAGGAGTTCACTCTGGAACAGCAACGTTGAAGGATGCTACATCAGAAGCGATAAGAGATTGGGTGACAAACGTTGAGACTACACATTACATATTGGGATCCGTGGCGGGTCCTCATCCTTACCCTATGATGGTCAGAGACTTTCACGCGGTGATAGGTAAAGAAACGAGGAGACAAGCGATGGAGAAATGGGGAGGGAAGCCGGATGTCTTGGTTGCTTGTGTTGGTGGGGGTTCGAACGCGATGGGACTCTTCCATGAGTTTGTGGATGATACAGAGGTCAGGTTGATCGGTGTGGAAGCTGCGGGATTTGGAGTGGATAGTGGTAAACACGCTGCTACGTTGACAAAGGGAGATGTTGGTGTTCTACATGGTGCTATGAGTTACTTGCTGCAAGATGATGATGGTCAAATCATTGAACCTCACTCCATCAGTGCAGGATTGGACTACCCTGGAGTTGGACCGGAGCACAGTTTCCTTAAAGACATGGGACGAGCTGAATACTTTAGCGTAACCGATGAAGAAGCGTTGGAAGCGTTCAAGAGAGTTTCGCGGTTAGAGGGAATCATCCCGGCACTGGAGACCTCTCACGCACTAGCTCACCTCGAGAAGCTGTGTCCCACGTTACCGGACGGAGCTAGAGTGGTCTTGAACTTCAGCGGAAGAGGAGATAAAGATGTTCAGACGGTGGCTAAATATCTTGAAGTTTGA
Protein:  
MAASSTVASFRTSVSSAPSPSSSLITHSRSPSKALKFTPLPSSRSRPSFSVSCTIAKDPPVLMSDPSLWQRPDSFGRFGKFGGKYVPETLMHALSELESAFHSLAADDDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLDCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRLIGVEAAGFGVDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDMGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTVAKYLEV